Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.17□□□□□ -0.46
Matn3O35701 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Matn3O35701 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.17□□□□□ -0.46
Matn3O35701 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.17□□□□□ -0.46
Matn3O35701 Gm9385-201ENSMUST00000117563 472 ntBASIC12.17□□□□□ -0.46
Matn3O35701 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.17□□□□□ -0.46
Matn3O35701 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.17□□□□□ -0.46
Matn3O35701 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.17□□□□□ -0.46
Matn3O35701 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.17□□□□□ -0.46
Matn3O35701 Gm27301-201ENSMUST00000184012 127 ntBASIC12.17□□□□□ -0.46
Matn3O35701 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.17□□□□□ -0.46
Matn3O35701 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Matn3O35701 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Matn3O35701 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.17□□□□□ -0.46
Matn3O35701 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Matn3O35701 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.17□□□□□ -0.46
Matn3O35701 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Matn3O35701 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Matn3O35701 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Matn3O35701 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.16□□□□□ -0.46
Matn3O35701 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.16□□□□□ -0.46
Matn3O35701 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.16□□□□□ -0.46
Matn3O35701 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.16□□□□□ -0.46
Matn3O35701 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.16□□□□□ -0.46
Matn3O35701 Thap2-203ENSMUST00000218989 527 ntBASIC12.16□□□□□ -0.46
Matn3O35701 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Matn3O35701 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Matn3O35701 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms