Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Atf6bO35451 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Atf6bO35451 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.69□□□□□ -0.54
Atf6bO35451 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf6bO35451 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.69□□□□□ -0.54
Atf6bO35451 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atf6bO35451 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Atf6bO35451 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf6bO35451 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Atf6bO35451 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Atf6bO35451 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.68□□□□□ -0.54
Atf6bO35451 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.68□□□□□ -0.54
Atf6bO35451 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.68□□□□□ -0.54
Atf6bO35451 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Atf6bO35451 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.68□□□□□ -0.54
Atf6bO35451 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Atf6bO35451 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.68□□□□□ -0.54
Atf6bO35451 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Atf6bO35451 Gm5354-201ENSMUST00000182417 973 ntBASIC11.68□□□□□ -0.54
Atf6bO35451 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.68□□□□□ -0.54
Atf6bO35451 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.68□□□□□ -0.54
Atf6bO35451 Gm19220-201ENSMUST00000222682 803 ntBASIC11.68□□□□□ -0.54
Atf6bO35451 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Atf6bO35451 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.68□□□□□ -0.54
Atf6bO35451 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atf6bO35451 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Atf6bO35451 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.67□□□□□ -0.54
Atf6bO35451 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.67□□□□□ -0.54
Atf6bO35451 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.67□□□□□ -0.54
Atf6bO35451 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.67□□□□□ -0.54
Atf6bO35451 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.67□□□□□ -0.54
Atf6bO35451 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.67□□□□□ -0.54
Atf6bO35451 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.67□□□□□ -0.54
Atf6bO35451 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.67□□□□□ -0.54
Atf6bO35451 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Atf6bO35451 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.67□□□□□ -0.54
Atf6bO35451 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.67□□□□□ -0.54
Atf6bO35451 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf6bO35451 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf6bO35451 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf6bO35451 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf6bO35451 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.66□□□□□ -0.54
Atf6bO35451 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atf6bO35451 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf6bO35451 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf6bO35451 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Atf6bO35451 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf6bO35451 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atf6bO35451 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms