Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.62□□□□□ -0.39
Cx3cl1O35188 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cx3cl1O35188 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cx3cl1O35188 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Gm12490-201ENSMUST00000120255 560 ntBASIC12.61□□□□□ -0.39
Cx3cl1O35188 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Gm27701-201ENSMUST00000184498 110 ntBASIC12.61□□□□□ -0.39
Cx3cl1O35188 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.61□□□□□ -0.39
Cx3cl1O35188 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.61□□□□□ -0.39
Cx3cl1O35188 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cx3cl1O35188 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Gm15678-201ENSMUST00000117573 960 ntBASIC12.6□□□□□ -0.39
Cx3cl1O35188 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.6□□□□□ -0.39
Cx3cl1O35188 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.6□□□□□ -0.39
Cx3cl1O35188 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cx3cl1O35188 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms