Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr1aO35134 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Polr1aO35134 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC20.22■□□□□ 0.83
Polr1aO35134 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC20.22■□□□□ 0.83
Polr1aO35134 AC154222.2-201ENSMUST00000225848 607 ntBASIC20.22■□□□□ 0.83
Polr1aO35134 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Polr1aO35134 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC20.22■□□□□ 0.83
Polr1aO35134 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC20.22■□□□□ 0.83
Polr1aO35134 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Polr1aO35134 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Polr1aO35134 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Polr1aO35134 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Polr1aO35134 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Polr1aO35134 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC20.22■□□□□ 0.83
Polr1aO35134 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC20.22■□□□□ 0.83
Polr1aO35134 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Polr1aO35134 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Polr1aO35134 Gm10702-201ENSMUST00000098929 1268 ntBASIC20.22■□□□□ 0.83
Polr1aO35134 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Gm14832-201ENSMUST00000121289 322 ntBASIC20.21■□□□□ 0.83
Polr1aO35134 Gm27023-201ENSMUST00000182372 285 ntBASIC20.21■□□□□ 0.83
Polr1aO35134 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Polr1aO35134 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr1aO35134 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Polr1aO35134 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC20.2■□□□□ 0.82
Polr1aO35134 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC20.2■□□□□ 0.82
Polr1aO35134 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC20.2■□□□□ 0.82
Polr1aO35134 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Gm24749-201ENSMUST00000157838 343 ntBASIC20.2■□□□□ 0.82
Polr1aO35134 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC20.2■□□□□ 0.82
Polr1aO35134 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Gm9025-201ENSMUST00000122415 1575 ntBASIC20.2■□□□□ 0.82
Polr1aO35134 AC113060.1-201ENSMUST00000225689 1573 ntBASIC20.2■□□□□ 0.82
Polr1aO35134 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Polr1aO35134 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr1aO35134 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC20.19■□□□□ 0.82
Polr1aO35134 Gm22902-201ENSMUST00000158488 302 ntBASIC20.19■□□□□ 0.82
Polr1aO35134 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC20.19■□□□□ 0.82
Polr1aO35134 AC113031.8-201ENSMUST00000227856 631 ntBASIC20.19■□□□□ 0.82
Polr1aO35134 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Polr1aO35134 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC20.19■□□□□ 0.82
Polr1aO35134 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Polr1aO35134 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC20.19■□□□□ 0.82
Polr1aO35134 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC20.19■□□□□ 0.82
Polr1aO35134 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC20.19■□□□□ 0.82
Polr1aO35134 Mir874-201ENSMUST00000104769 76 ntBASIC20.19■□□□□ 0.82
Polr1aO35134 Gm9083-201ENSMUST00000120423 819 ntBASIC20.19■□□□□ 0.82
Polr1aO35134 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC20.19■□□□□ 0.82
Polr1aO35134 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms