Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.36□□□□□ -0.59
Gm3727J3QM54 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.36□□□□□ -0.59
Gm3727J3QM54 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gm5177-201ENSMUST00000183092 997 ntBASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gm6443-201ENSMUST00000203599 874 ntBASIC11.36□□□□□ -0.59
Gm3727J3QM54 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gm7461-201ENSMUST00000058918 827 ntBASIC11.36□□□□□ -0.59
Gm3727J3QM54 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm3727J3QM54 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3727J3QM54 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.35□□□□□ -0.59
Gm3727J3QM54 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Gm9385-201ENSMUST00000117563 472 ntBASIC11.35□□□□□ -0.59
Gm3727J3QM54 Gm13036-201ENSMUST00000117799 748 ntBASIC11.35□□□□□ -0.59
Gm3727J3QM54 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.35□□□□□ -0.59
Gm3727J3QM54 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Gm43347-201ENSMUST00000200226 580 ntBASIC11.35□□□□□ -0.59
Gm3727J3QM54 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Rps4l-201ENSMUST00000071745 943 ntBASIC11.35□□□□□ -0.59
Gm3727J3QM54 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.35□□□□□ -0.59
Gm3727J3QM54 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3727J3QM54 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.34□□□□□ -0.59
Gm3727J3QM54 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms