Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4aE9Q735 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.02■□□□□ 0.15
Ube4aE9Q735 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4aE9Q735 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.02■□□□□ 0.15
Ube4aE9Q735 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Gm15370-201ENSMUST00000117158 253 ntBASIC16.01■□□□□ 0.15
Ube4aE9Q735 Gm17208-201ENSMUST00000168388 535 ntBASIC16.01■□□□□ 0.15
Ube4aE9Q735 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.01■□□□□ 0.15
Ube4aE9Q735 Gm5781-201ENSMUST00000219792 443 ntBASIC16.01■□□□□ 0.15
Ube4aE9Q735 Gm24526-201ENSMUST00000082921 158 ntBASIC16.01■□□□□ 0.15
Ube4aE9Q735 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.01■□□□□ 0.15
Ube4aE9Q735 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4aE9Q735 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Ube4aE9Q735 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Gm5637-201ENSMUST00000153890 1119 ntBASIC16■□□□□ 0.15
Ube4aE9Q735 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16■□□□□ 0.15
Ube4aE9Q735 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Ube4aE9Q735 Gm38241-201ENSMUST00000192641 898 ntBASIC16■□□□□ 0.15
Ube4aE9Q735 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16■□□□□ 0.15
Ube4aE9Q735 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ube4aE9Q735 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16■□□□□ 0.15
Ube4aE9Q735 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16■□□□□ 0.15
Ube4aE9Q735 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Gm10676-201ENSMUST00000098778 3221 ntBASIC16■□□□□ 0.15
Ube4aE9Q735 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ube4aE9Q735 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Gm3756-201ENSMUST00000169182 1355 ntBASIC16■□□□□ 0.15
Ube4aE9Q735 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4aE9Q735 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm22323-201ENSMUST00000103832 109 ntBASIC15.99■□□□□ 0.15
Ube4aE9Q735 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm27243-201ENSMUST00000183964 521 ntBASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm6621-201ENSMUST00000193251 772 ntBASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm37259-201ENSMUST00000193903 849 ntBASIC15.99■□□□□ 0.15
Ube4aE9Q735 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm32025-201ENSMUST00000217960 307 ntBASIC15.99■□□□□ 0.15
Ube4aE9Q735 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.99■□□□□ 0.15
Ube4aE9Q735 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms