Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm29304-201ENSMUST00000186555 695 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm29223-201ENSMUST00000188867 695 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm37921-201ENSMUST00000194333 695 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm6450-201ENSMUST00000200896 574 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm17831-201ENSMUST00000205579 900 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Mir698-201ENSMUST00000102164 109 ntBASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Gm13809-201ENSMUST00000117921 597 ntBASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a3E9PWQ3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a3E9PWQ3 Mir744-201ENSMUST00000103261 100 ntBASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Gm11942-201ENSMUST00000180255 345 ntBASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a3E9PWQ3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm11422-201ENSMUST00000118925 1103 ntBASIC13□□□□□ -0.33
Col6a3E9PWQ3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Mir8115-201ENSMUST00000184992 119 ntBASIC13□□□□□ -0.33
Col6a3E9PWQ3 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms