Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Gm6736-201ENSMUST00000166583 948 ntBASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Gm27618-201ENSMUST00000183671 60 ntBASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Gm24447-201ENSMUST00000083977 338 ntBASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm5878E9PUB3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Gm13453-201ENSMUST00000118708 357 ntBASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 AU022133-201ENSMUST00000200601 873 ntBASIC10.15□□□□□ -0.78
Gm5878E9PUB3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm5878E9PUB3 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms