Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Gm18734-201ENSMUST00000172937 808 ntBASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Gm9211-201ENSMUST00000182882 975 ntBASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Gm45433-201ENSMUST00000209386 247 ntBASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Gm45925-201ENSMUST00000218882 744 ntBASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Gzmn-202ENSMUST00000225535 989 ntBASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Gm2673-201ENSMUST00000120958 1608 ntBASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Gm14832-201ENSMUST00000121289 322 ntBASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Gm8018-201ENSMUST00000173536 789 ntBASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hfm1D3Z4R1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Gm3508-201ENSMUST00000186012 792 ntBASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 D9Wsu149-201ENSMUST00000214169 594 ntBASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hfm1D3Z4R1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Gm9555-201ENSMUST00000200908 583 ntBASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Gm7848-201ENSMUST00000210739 718 ntBASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms