Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.16□□□□□ -0.46
Gm3543D3Z235 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.15□□□□□ -0.46
Gm3543D3Z235 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.15□□□□□ -0.46
Gm3543D3Z235 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.15□□□□□ -0.46
Gm3543D3Z235 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gm27701-201ENSMUST00000184498 110 ntBASIC12.15□□□□□ -0.46
Gm3543D3Z235 Mir7654-201ENSMUST00000185082 70 ntBASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.15□□□□□ -0.46
Gm3543D3Z235 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.15□□□□□ -0.46
Gm3543D3Z235 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm3543D3Z235 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3543D3Z235 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.15□□□□□ -0.47
Gm3543D3Z235 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3543D3Z235 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.15□□□□□ -0.47
Gm3543D3Z235 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Gm3543D3Z235 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3543D3Z235 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3543D3Z235 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3543D3Z235 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.14□□□□□ -0.47
Gm3543D3Z235 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.14□□□□□ -0.47
Gm3543D3Z235 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.14□□□□□ -0.47
Gm3543D3Z235 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.14□□□□□ -0.47
Gm3543D3Z235 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.14□□□□□ -0.47
Gm3543D3Z235 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3543D3Z235 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.13□□□□□ -0.47
Gm3543D3Z235 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms