Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Gm45453-201ENSMUST00000211758 853 ntBASIC10.82□□□□□ -0.68
Gm12887B1AVM1 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.82□□□□□ -0.68
Gm12887B1AVM1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm12887B1AVM1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm15427-201ENSMUST00000117288 531 ntBASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm13884-201ENSMUST00000118103 829 ntBASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm44492-201ENSMUST00000197012 141 ntBASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm5864-201ENSMUST00000202263 970 ntBASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms