Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm42657-201ENSMUST00000201746 211 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm44069-201ENSMUST00000204898 506 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Mir497b-201ENSMUST00000093601 125 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm12943-201ENSMUST00000119616 210 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm29741-201ENSMUST00000192667 421 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm5298-201ENSMUST00000201122 892 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm45398-201ENSMUST00000210561 165 ntBASIC10.73□□□□□ -0.69
Chd6A3KFM7 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd6A3KFM7 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm22877-201ENSMUST00000175451 105 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm9136-201ENSMUST00000193368 454 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms