Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm37922-201ENSMUST00000195596 455 ntBASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.3□□□□□ -0.6
Col6a4A2AX52 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 B9d1os-201ENSMUST00000137010 674 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm24990-201ENSMUST00000157406 323 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm29787-201ENSMUST00000222129 849 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm16372-201ENSMUST00000073088 450 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm11964-201ENSMUST00000120982 444 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a4A2AX52 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a4A2AX52 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.29□□□□□ -0.6
Col6a4A2AX52 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.28□□□□□ -0.6
Col6a4A2AX52 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.28□□□□□ -0.6
Col6a4A2AX52 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.28□□□□□ -0.6
Col6a4A2AX52 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Gm11591-201ENSMUST00000120063 702 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms