Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Igkv8-27A0A0G2JF28 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 AC139350.1-201ENSMUST00000227064 1594 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm11764-201ENSMUST00000120221 623 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm4899-201ENSMUST00000178708 719 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm2272-201ENSMUST00000194903 582 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 AC160338.1-201ENSMUST00000214232 705 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 AC093022.5-201ENSMUST00000226841 1079 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm10154-201ENSMUST00000084445 354 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm44292-201ENSMUST00000205194 2364 ntBASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Igkv8-27A0A0G2JF28 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm1995-201ENSMUST00000220838 2602 ntBASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms