Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm6916-202ENSMUST00000205523 195 ntBASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 AC122881.1-201ENSMUST00000225757 2695 ntBASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms