Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Gm14701-201ENSMUST00000117156 348 ntBASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm6912-201ENSMUST00000117218 544 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm14767-201ENSMUST00000121559 586 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm25948-201ENSMUST00000175334 112 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm44344-201ENSMUST00000200287 129 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb3S4R1G7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Gm15770-201ENSMUST00000117498 584 ntBASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms