Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Gm13385-201ENSMUST00000121089 220 ntBASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Skp2Q9Z0Z3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Gm25144-201ENSMUST00000179561 110 ntBASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Gm25352-201ENSMUST00000179815 110 ntBASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Skp2Q9Z0Z3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.21□□□□□ -0.46
Skp2Q9Z0Z3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Gm15393-201ENSMUST00000120499 219 ntBASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Gm27702-201ENSMUST00000184512 56 ntBASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Skp2Q9Z0Z3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms