Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
ClcnkaQ9WUB7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
ClcnkaQ9WUB7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.4□□□□□ -0.43
ClcnkaQ9WUB7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm22189-201ENSMUST00000103822 86 ntBASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Mir6977-201ENSMUST00000184960 64 ntBASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm7730-201ENSMUST00000212486 454 ntBASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClcnkaQ9WUB7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gm42612-201ENSMUST00000197986 623 ntBASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gm43170-201ENSMUST00000199827 612 ntBASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Gm6218-201ENSMUST00000219812 628 ntBASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ClcnkaQ9WUB7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms