Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Gm7063-201ENSMUST00000186840 981 ntBASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Mir874-201ENSMUST00000104769 76 ntBASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gm13612-201ENSMUST00000119276 390 ntBASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3aQ9JKX8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Upk3aQ9JKX8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms