Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Gm12490-201ENSMUST00000120255 560 ntBASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Gm21470-201ENSMUST00000187680 696 ntBASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Gm15823-201ENSMUST00000064305 670 ntBASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tubb3Q9ERD7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm12091-201ENSMUST00000146791 830 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm18018-201ENSMUST00000198273 408 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm18027-201ENSMUST00000218947 619 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms