Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gm22323-201ENSMUST00000103832 109 ntBASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gm29396-201ENSMUST00000185659 716 ntBASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gm8099-201ENSMUST00000200510 742 ntBASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gm7783-201ENSMUST00000204795 781 ntBASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf1Q9EPU4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Gm7584-201ENSMUST00000175829 940 ntBASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf1Q9EPU4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Gm17208-201ENSMUST00000168388 535 ntBASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Gm5781-201ENSMUST00000219792 443 ntBASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Gm8227-201ENSMUST00000223306 571 ntBASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 AC069562.3-201ENSMUST00000225387 587 ntBASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 AC138604.1-201ENSMUST00000226969 739 ntBASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf1Q9EPU4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC18.27■□□□□ 0.51
Cpsf1Q9EPU4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Cpsf1Q9EPU4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms