Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm13886-201ENSMUST00000117876 1183 ntBASIC14□□□□□ -0.17
Cpne8Q9DC53 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm12485-201ENSMUST00000119641 291 ntBASIC14□□□□□ -0.17
Cpne8Q9DC53 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm26464-201ENSMUST00000157094 305 ntBASIC14□□□□□ -0.17
Cpne8Q9DC53 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm27772-201ENSMUST00000184900 187 ntBASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm5279-201ENSMUST00000199575 745 ntBASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm18041-201ENSMUST00000218210 618 ntBASIC14□□□□□ -0.17
Cpne8Q9DC53 Gm17330-201ENSMUST00000221047 165 ntBASIC14□□□□□ -0.17
Cpne8Q9DC53 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpne8Q9DC53 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne8Q9DC53 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Mir7684-201ENSMUST00000183858 60 ntBASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Mir8102-201ENSMUST00000184148 139 ntBASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Gm6218-201ENSMUST00000219812 628 ntBASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne8Q9DC53 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms