Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Gm6888-201ENSMUST00000221983 706 ntBASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Llcfc1Q9D9P8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Gm22175-201ENSMUST00000175007 78 ntBASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Llcfc1Q9D9P8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Gm6736-201ENSMUST00000166583 948 ntBASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Llcfc1Q9D9P8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Llcfc1Q9D9P8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Gm13453-201ENSMUST00000118708 357 ntBASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.14□□□□□ -0.15
Llcfc1Q9D9P8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms