Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Gm16215-201ENSMUST00000161990 637 ntBASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Gm42612-201ENSMUST00000197986 623 ntBASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Gm43170-201ENSMUST00000199827 612 ntBASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Gm7730-201ENSMUST00000212486 454 ntBASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp4bQ9D8B3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Mir7221-201ENSMUST00000184009 72 ntBASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp4bQ9D8B3 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.89■□□□□ 0.3
Chmp4bQ9D8B3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp4bQ9D8B3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp4bQ9D8B3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Chmp4bQ9D8B3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Gm15371-201ENSMUST00000117057 784 ntBASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4bQ9D8B3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms