Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc130Q9D516 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc130Q9D516 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc130Q9D516 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Gm44344-201ENSMUST00000200287 129 ntBASIC13.54□□□□□ -0.24
Ccdc130Q9D516 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc130Q9D516 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Gm9229-201ENSMUST00000222777 126 ntBASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc130Q9D516 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc130Q9D516 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.52□□□□□ -0.24
Ccdc130Q9D516 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Gm15460-201ENSMUST00000118147 391 ntBASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Gm14767-201ENSMUST00000121559 586 ntBASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Mir6956-201ENSMUST00000183598 62 ntBASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Gm27680-201ENSMUST00000184192 160 ntBASIC13.52□□□□□ -0.25
Ccdc130Q9D516 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Gm44719-201ENSMUST00000206404 149 ntBASIC13.52□□□□□ -0.25
Ccdc130Q9D516 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms