Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Gm21811-201ENSMUST00000096485 930 ntBASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd1Q9D0E3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Gm13549-201ENSMUST00000118339 796 ntBASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Gm12501-201ENSMUST00000119163 529 ntBASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Mir7686-201ENSMUST00000200604 57 ntBASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lysmd1Q9D0E3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Gm7851-201ENSMUST00000117574 323 ntBASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Mir3060-201ENSMUST00000175339 83 ntBASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Gm42511-201ENSMUST00000196160 234 ntBASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Ighv1-86-201ENSMUST00000200562 353 ntBASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lysmd1Q9D0E3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Gm12015-201ENSMUST00000117065 843 ntBASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd1Q9D0E3 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms