Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Gm25911-201ENSMUST00000157621 56 ntBASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Gm27631-201ENSMUST00000184163 466 ntBASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Mir125a-201ENSMUST00000083545 68 ntBASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim13Q9CYB0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim13Q9CYB0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim13Q9CYB0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trim13Q9CYB0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.4□□□□□ -0.43
Trim13Q9CYB0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms