Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Gm17837-201ENSMUST00000186435 985 ntBASIC15.81■□□□□ 0.12
Smc3Q9CW03 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.81■□□□□ 0.12
Smc3Q9CW03 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Gm15678-201ENSMUST00000117573 960 ntBASIC15.8■□□□□ 0.12
Smc3Q9CW03 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.8■□□□□ 0.12
Smc3Q9CW03 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.8■□□□□ 0.12
Smc3Q9CW03 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.8■□□□□ 0.12
Smc3Q9CW03 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.8■□□□□ 0.12
Smc3Q9CW03 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smc3Q9CW03 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.79■□□□□ 0.12
Smc3Q9CW03 Gm15240-201ENSMUST00000118156 720 ntBASIC15.79■□□□□ 0.12
Smc3Q9CW03 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.79■□□□□ 0.12
Smc3Q9CW03 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.79■□□□□ 0.12
Smc3Q9CW03 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smc3Q9CW03 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc3Q9CW03 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.78■□□□□ 0.12
Smc3Q9CW03 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc3Q9CW03 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.78■□□□□ 0.12
Smc3Q9CW03 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms