Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Mir6392-201ENSMUST00000184924 108 ntBASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Gm18624-201ENSMUST00000220966 658 ntBASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa3Q9CQ71 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa3Q9CQ71 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa3Q9CQ71 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa3Q9CQ71 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rpa3Q9CQ71 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rpa3Q9CQ71 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.21□□□□□ -0.14
Rpa3Q9CQ71 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Gm38144-201ENSMUST00000192790 465 ntBASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rpa3Q9CQ71 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm12403-201ENSMUST00000121384 959 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpa3Q9CQ71 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms