Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.02□□□□□ -0.64
Prpf8Q99PV0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm4857-201ENSMUST00000192718 785 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm43758-201ENSMUST00000199500 367 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Prpf8Q99PV0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm8584-201ENSMUST00000171982 758 ntBASIC11.01□□□□□ -0.65
Prpf8Q99PV0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm42627-201ENSMUST00000197347 224 ntBASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm11618-201ENSMUST00000117946 267 ntBASIC11.01□□□□□ -0.65
Prpf8Q99PV0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm37259-201ENSMUST00000193903 849 ntBASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm44364-201ENSMUST00000198368 141 ntBASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.01□□□□□ -0.65
Prpf8Q99PV0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Prpf8Q99PV0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prpf8Q99PV0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prpf8Q99PV0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prpf8Q99PV0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11□□□□□ -0.65
Prpf8Q99PV0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Prpf8Q99PV0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11□□□□□ -0.65
Prpf8Q99PV0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Prpf8Q99PV0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11□□□□□ -0.65
Prpf8Q99PV0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Prpf8Q99PV0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Prpf8Q99PV0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Prpf8Q99PV0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms