Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim11Q99PQ2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Gm9797-201ENSMUST00000052902 613 ntBASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Gm5867-201ENSMUST00000063197 592 ntBASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Gm24447-201ENSMUST00000083977 338 ntBASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim11Q99PQ2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Mir874-201ENSMUST00000104769 76 ntBASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gm12485-201ENSMUST00000119641 291 ntBASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gm14719-201ENSMUST00000121891 340 ntBASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gm24694-201ENSMUST00000180054 110 ntBASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gm27663-201ENSMUST00000184839 110 ntBASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim11Q99PQ2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.29■□□□□ 0.04
Trim11Q99PQ2 Gm5279-201ENSMUST00000199575 745 ntBASIC15.29■□□□□ 0.04
Trim11Q99PQ2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms