Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Gm38144-201ENSMUST00000192790 465 ntBASIC14.43□□□□□ -0.1
Tlr3Q99MB1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Gm15806-201ENSMUST00000120696 955 ntBASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tlr3Q99MB1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.41□□□□□ -0.1
Tlr3Q99MB1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tlr3Q99MB1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tlr3Q99MB1 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms