Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.78□□□□□ -0.52
Scrt1Q99M85 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.78□□□□□ -0.52
Scrt1Q99M85 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Gm22018-201ENSMUST00000104357 131 ntBASIC11.78□□□□□ -0.52
Scrt1Q99M85 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scrt1Q99M85 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.78□□□□□ -0.52
Scrt1Q99M85 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.78□□□□□ -0.52
Scrt1Q99M85 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.78□□□□□ -0.52
Scrt1Q99M85 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scrt1Q99M85 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.77□□□□□ -0.52
Scrt1Q99M85 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scrt1Q99M85 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gm27331-201ENSMUST00000183705 60 ntBASIC11.77□□□□□ -0.53
Scrt1Q99M85 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gm38002-201ENSMUST00000193255 180 ntBASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gm7783-201ENSMUST00000204795 781 ntBASIC11.77□□□□□ -0.53
Scrt1Q99M85 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.77□□□□□ -0.53
Scrt1Q99M85 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Scrt1Q99M85 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Gm15808-201ENSMUST00000119046 604 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 Gm26461-201ENSMUST00000175064 290 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Gm38266-201ENSMUST00000194931 421 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 Gm37008-201ENSMUST00000195712 319 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms