Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Gm14767-201ENSMUST00000121559 586 ntBASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Gm27321-201ENSMUST00000185021 205 ntBASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Gm38294-201ENSMUST00000192831 381 ntBASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Syt7-205ENSMUST00000224135 1557 ntBASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm15240-201ENSMUST00000118156 720 ntBASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm6736-201ENSMUST00000166583 948 ntBASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm6888-201ENSMUST00000221983 706 ntBASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.93□□□□□ -0.18
Cdk5rap3Q99LM2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Gm22175-201ENSMUST00000175007 78 ntBASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk5rap3Q99LM2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms