Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Gm11978-201ENSMUST00000122315 466 ntBASIC14.1□□□□□ -0.15
Clp1Q99LI9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.1□□□□□ -0.15
Clp1Q99LI9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.09□□□□□ -0.15
Clp1Q99LI9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clp1Q99LI9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Gm8738-201ENSMUST00000172606 329 ntBASIC14.09□□□□□ -0.15
Clp1Q99LI9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Gm30285-201ENSMUST00000214614 422 ntBASIC14.09□□□□□ -0.15
Clp1Q99LI9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.09□□□□□ -0.15
Clp1Q99LI9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.09□□□□□ -0.15
Clp1Q99LI9 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clp1Q99LI9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clp1Q99LI9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clp1Q99LI9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clp1Q99LI9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clp1Q99LI9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gm12134-201ENSMUST00000122109 520 ntBASIC14.08□□□□□ -0.16
Clp1Q99LI9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gm45186-201ENSMUST00000206874 478 ntBASIC14.08□□□□□ -0.16
Clp1Q99LI9 Nsd1-205ENSMUST00000224693 852 ntBASIC14.08□□□□□ -0.16
Clp1Q99LI9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.08□□□□□ -0.16
Clp1Q99LI9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.08□□□□□ -0.16
Clp1Q99LI9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clp1Q99LI9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.07□□□□□ -0.16
Clp1Q99LI9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm14017-201ENSMUST00000121934 386 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms