Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cstf3Q99LI7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Mir6956-201ENSMUST00000183598 62 ntBASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Gm17795-201ENSMUST00000214505 757 ntBASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cstf3Q99LI7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms