Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Gm15321-201ENSMUST00000121290 288 ntBASIC12.99□□□□□ -0.33
Vmp1Q99KU0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Gm37714-201ENSMUST00000194742 342 ntBASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vmp1Q99KU0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm4804-201ENSMUST00000182234 999 ntBASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm9522-201ENSMUST00000182394 926 ntBASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm7063-201ENSMUST00000186840 981 ntBASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm44855-201ENSMUST00000205725 362 ntBASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Gm5425-201ENSMUST00000214125 459 ntBASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmp1Q99KU0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.97□□□□□ -0.33
Vmp1Q99KU0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms