Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.17□□□□□ -0.14
Usp11Q99K46 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Gm15321-201ENSMUST00000121290 288 ntBASIC14.17□□□□□ -0.14
Usp11Q99K46 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Gm9522-201ENSMUST00000182394 926 ntBASIC14.17□□□□□ -0.14
Usp11Q99K46 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Gm20445-201ENSMUST00000061905 565 ntBASIC14.17□□□□□ -0.14
Usp11Q99K46 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp11Q99K46 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp11Q99K46 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.16□□□□□ -0.14
Usp11Q99K46 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp11Q99K46 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp11Q99K46 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp11Q99K46 Gm27437-201ENSMUST00000183429 107 ntBASIC14.16□□□□□ -0.14
Usp11Q99K46 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Usp11Q99K46 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp11Q99K46 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp11Q99K46 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp11Q99K46 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp11Q99K46 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp11Q99K46 Rubie-203ENSMUST00000227803 2430 ntBASIC14.16□□□□□ -0.14
Usp11Q99K46 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.16□□□□□ -0.14
Usp11Q99K46 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp11Q99K46 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.15□□□□□ -0.14
Usp11Q99K46 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.15□□□□□ -0.14
Usp11Q99K46 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Gm16215-201ENSMUST00000161990 637 ntBASIC14.15□□□□□ -0.14
Usp11Q99K46 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Gm5425-201ENSMUST00000214125 459 ntBASIC14.15□□□□□ -0.14
Usp11Q99K46 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.15□□□□□ -0.14
Usp11Q99K46 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp11Q99K46 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.15□□□□□ -0.14
Usp11Q99K46 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.15□□□□□ -0.14
Usp11Q99K46 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp11Q99K46 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms