Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Gm8805-201ENSMUST00000117848 313 ntBASIC15.43■□□□□ 0.06
Rfc4Q99J62 Gm14381-201ENSMUST00000122105 414 ntBASIC15.43■□□□□ 0.06
Rfc4Q99J62 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Gm37489-201ENSMUST00000191883 159 ntBASIC15.43■□□□□ 0.06
Rfc4Q99J62 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.43■□□□□ 0.06
Rfc4Q99J62 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfc4Q99J62 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rfc4Q99J62 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Gm22323-201ENSMUST00000103832 109 ntBASIC15.42■□□□□ 0.06
Rfc4Q99J62 Gm24255-201ENSMUST00000104481 128 ntBASIC15.42■□□□□ 0.06
Rfc4Q99J62 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Gm6621-201ENSMUST00000193251 772 ntBASIC15.42■□□□□ 0.06
Rfc4Q99J62 Gm44069-201ENSMUST00000204898 506 ntBASIC15.42■□□□□ 0.06
Rfc4Q99J62 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.42■□□□□ 0.06
Rfc4Q99J62 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Mir433-201ENSMUST00000093564 124 ntBASIC15.42■□□□□ 0.06
Rfc4Q99J62 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfc4Q99J62 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Gm16202-201ENSMUST00000117532 544 ntBASIC15.41■□□□□ 0.06
Rfc4Q99J62 Gm13297-201ENSMUST00000120205 934 ntBASIC15.41■□□□□ 0.06
Rfc4Q99J62 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Gm38158-201ENSMUST00000194617 339 ntBASIC15.41■□□□□ 0.06
Rfc4Q99J62 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.41■□□□□ 0.06
Rfc4Q99J62 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rfc4Q99J62 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.41■□□□□ 0.06
Rfc4Q99J62 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.41■□□□□ 0.06
Rfc4Q99J62 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc4Q99J62 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms