Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Gm18827-201ENSMUST00000188341 790 ntBASIC20.86■□□□□ 0.93
Clip1Q922J3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clip1Q922J3 AC159747.1-201ENSMUST00000219903 265 ntBASIC20.86■□□□□ 0.93
Clip1Q922J3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Gm12626-201ENSMUST00000117339 1983 ntBASIC20.86■□□□□ 0.93
Clip1Q922J3 Gm12623-201ENSMUST00000119849 1983 ntBASIC20.86■□□□□ 0.93
Clip1Q922J3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 AC135669.1-202ENSMUST00000216742 540 ntBASIC20.85■□□□□ 0.93
Clip1Q922J3 Morn2-202ENSMUST00000227729 656 ntBASIC20.85■□□□□ 0.93
Clip1Q922J3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC20.85■□□□□ 0.93
Clip1Q922J3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Clip1Q922J3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC20.85■□□□□ 0.93
Clip1Q922J3 Gm11964-201ENSMUST00000120982 444 ntBASIC20.85■□□□□ 0.93
Clip1Q922J3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clip1Q922J3 Gm38000-201ENSMUST00000192390 1215 ntBASIC20.85■□□□□ 0.93
Clip1Q922J3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC20.85■□□□□ 0.93
Clip1Q922J3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip1Q922J3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Clip1Q922J3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC20.84■□□□□ 0.93
Clip1Q922J3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip1Q922J3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Clip1Q922J3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip1Q922J3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clip1Q922J3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip1Q922J3 Gm13316-201ENSMUST00000140537 691 ntBASIC20.84■□□□□ 0.93
Clip1Q922J3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clip1Q922J3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Clip1Q922J3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip1Q922J3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip1Q922J3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip1Q922J3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Clip1Q922J3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Clip1Q922J3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip1Q922J3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip1Q922J3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip1Q922J3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip1Q922J3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip1Q922J3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Clip1Q922J3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clip1Q922J3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clip1Q922J3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Clip1Q922J3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clip1Q922J3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC20.83■□□□□ 0.92
Clip1Q922J3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC20.83■□□□□ 0.92
Clip1Q922J3 Gm17376-201ENSMUST00000166016 84 ntBASIC20.83■□□□□ 0.92
Clip1Q922J3 Gm22121-201ENSMUST00000175148 54 ntBASIC20.83■□□□□ 0.92
Clip1Q922J3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC20.83■□□□□ 0.92
Clip1Q922J3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Clip1Q922J3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clip1Q922J3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clip1Q922J3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clip1Q922J3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clip1Q922J3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC20.83■□□□□ 0.92
Clip1Q922J3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC20.82■□□□□ 0.92
Clip1Q922J3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Clip1Q922J3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Clip1Q922J3 Mir877-201ENSMUST00000104738 85 ntBASIC20.82■□□□□ 0.92
Clip1Q922J3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms