Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Gm15321-201ENSMUST00000121290 288 ntBASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Gm7063-201ENSMUST00000186840 981 ntBASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha8Q91Y12 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdha8Q91Y12 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdha8Q91Y12 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdha8Q91Y12 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Pcdha8Q91Y12 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdha8Q91Y12 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha8Q91Y12 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms