Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb15Q91Y04 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb15Q91Y04 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhb15Q91Y04 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm4875-201ENSMUST00000118257 786 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm12403-201ENSMUST00000121384 959 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm43575-201ENSMUST00000196420 516 ntBASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb15Q91Y04 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb15Q91Y04 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms