Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb18Q91Y02 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb18Q91Y02 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb18Q91Y02 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Gm6013-201ENSMUST00000212264 699 ntBASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Gm45880-201ENSMUST00000213041 853 ntBASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Gm26315-201ENSMUST00000083890 321 ntBASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb18Q91Y02 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Gm12203-201ENSMUST00000118235 598 ntBASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Gm12209-201ENSMUST00000120089 596 ntBASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Gm29608-201ENSMUST00000190444 463 ntBASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb18Q91Y02 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb18Q91Y02 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Gm1335-201ENSMUST00000121653 386 ntBASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb18Q91Y02 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms