Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gm42942-201ENSMUST00000196086 1328 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Gm28631-201ENSMUST00000190740 334 ntBASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Gm19220-201ENSMUST00000222682 803 ntBASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 CT030185.2-201ENSMUST00000222614 1310 ntBASIC13.37□□□□□ -0.27
Pcdhb20Q91XZ9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 AC139754.2-201ENSMUST00000218037 1455 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm42852-201ENSMUST00000202649 1379 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm12885-201ENSMUST00000122246 328 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm15279-201ENSMUST00000155593 288 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm25971-201ENSMUST00000158953 286 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm29741-201ENSMUST00000192667 421 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm37599-201ENSMUST00000193067 489 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm43138-201ENSMUST00000199123 708 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm44823-201ENSMUST00000204775 1107 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm18905-201ENSMUST00000205454 928 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms