Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm44487-201ENSMUST00000205145 325 ntBASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm18624-201ENSMUST00000220966 658 ntBASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb6Q91XZ4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Mir874-201ENSMUST00000104769 76 ntBASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Gm37917-201ENSMUST00000194711 392 ntBASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Gm18307-201ENSMUST00000206864 949 ntBASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.78□□□□□ -0.2
Pcdhb6Q91XZ4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms