Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.32□□□□□ -0.28
Usb1Q91W78 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Usb1Q91W78 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.32□□□□□ -0.28
Usb1Q91W78 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usb1Q91W78 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.31□□□□□ -0.28
Usb1Q91W78 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Usb1Q91W78 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Usb1Q91W78 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Usb1Q91W78 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Usb1Q91W78 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Gm15240-201ENSMUST00000118156 720 ntBASIC13.31□□□□□ -0.28
Usb1Q91W78 Gm5279-201ENSMUST00000199575 745 ntBASIC13.31□□□□□ -0.28
Usb1Q91W78 Gm17795-201ENSMUST00000214505 757 ntBASIC13.31□□□□□ -0.28
Usb1Q91W78 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.31□□□□□ -0.28
Usb1Q91W78 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usb1Q91W78 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.31□□□□□ -0.28
Usb1Q91W78 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.31□□□□□ -0.28
Usb1Q91W78 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.31□□□□□ -0.28
Usb1Q91W78 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usb1Q91W78 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.3□□□□□ -0.28
Usb1Q91W78 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.3□□□□□ -0.28
Usb1Q91W78 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Usb1Q91W78 Mir6392-201ENSMUST00000184924 108 ntBASIC13.3□□□□□ -0.28
Usb1Q91W78 Gm6745-201ENSMUST00000199216 526 ntBASIC13.3□□□□□ -0.28
Usb1Q91W78 Gm18905-201ENSMUST00000205454 928 ntBASIC13.3□□□□□ -0.28
Usb1Q91W78 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Gm6180-201ENSMUST00000065243 498 ntBASIC13.3□□□□□ -0.28
Usb1Q91W78 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Usb1Q91W78 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.3□□□□□ -0.28
Usb1Q91W78 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Usb1Q91W78 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usb1Q91W78 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.3□□□□□ -0.28
Usb1Q91W78 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.3□□□□□ -0.28
Usb1Q91W78 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.3□□□□□ -0.28
Usb1Q91W78 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms