Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
StrcQ8VIM6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
StrcQ8VIM6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
StrcQ8VIM6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.55■□□□□ 0.08
StrcQ8VIM6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm23251-201ENSMUST00000103773 110 ntBASIC15.55■□□□□ 0.08
StrcQ8VIM6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm12314-201ENSMUST00000118104 538 ntBASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.55■□□□□ 0.08
StrcQ8VIM6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.55■□□□□ 0.08
StrcQ8VIM6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
StrcQ8VIM6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Rmrp-201ENSMUST00000157463 271 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm14058-201ENSMUST00000116082 735 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm11675-201ENSMUST00000121873 832 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.54■□□□□ 0.08
StrcQ8VIM6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.54■□□□□ 0.08
StrcQ8VIM6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
StrcQ8VIM6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
StrcQ8VIM6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
StrcQ8VIM6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
StrcQ8VIM6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
StrcQ8VIM6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
StrcQ8VIM6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
StrcQ8VIM6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
StrcQ8VIM6 Gm13888-201ENSMUST00000119148 422 ntBASIC15.53■□□□□ 0.08
StrcQ8VIM6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
StrcQ8VIM6 Gm12196-201ENSMUST00000120954 262 ntBASIC15.53■□□□□ 0.08
StrcQ8VIM6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms