Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lsm1Q8VC85 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lsm1Q8VC85 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm1Q8VC85 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.9□□□□□ -0.35
Lsm1Q8VC85 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm1Q8VC85 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.9□□□□□ -0.35
Lsm1Q8VC85 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm1Q8VC85 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm1Q8VC85 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm1Q8VC85 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms