Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps39Q8R5L3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps39Q8R5L3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gm5867-201ENSMUST00000063197 592 ntBASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps39Q8R5L3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms