Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim29Q8R2Q0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Gm11524-201ENSMUST00000119349 807 ntBASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Gm5354-201ENSMUST00000182417 973 ntBASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Gm5161-201ENSMUST00000075243 853 ntBASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Gm24447-201ENSMUST00000083977 338 ntBASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.35■□□□□ 0.05
Trim29Q8R2Q0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gm19078-201ENSMUST00000206311 727 ntBASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gm7730-201ENSMUST00000212486 454 ntBASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Gm19220-201ENSMUST00000222682 803 ntBASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim29Q8R2Q0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim29Q8R2Q0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim29Q8R2Q0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Mir6977-201ENSMUST00000184960 64 ntBASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Gm42612-201ENSMUST00000197986 623 ntBASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Gm43170-201ENSMUST00000199827 612 ntBASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Gm44855-201ENSMUST00000205725 362 ntBASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim29Q8R2Q0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms